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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788706.1_cds_XP_016476937.1_639
CDS Infomation

[gene=LOC107798427] [db_xref=GeneID:107798427] [protein=vacuolar cation/proton exchanger 3-like] [protein_id=XP_016476937.1] [location=complement(join(6220..6275,6674..6764,6979..7095,7532..7585,7662..7778,7893..8024,8532..8759,8848..9044,9754..9782,9893..9960,10616..10906))] [gbkey=CDS]
Sequence

ATGGCTTCATCAGCAGCACCAGCAGCTGAAACATGGCTCTTAGAAAATGGAAACATTAAG
CCCTTAAGCAAAGAAATGAGGCACGGACATGGCCGTAGCCGAACAGCTCACAACGTGTCC
TCATCATCTCTGAGAAAAAAATCCGATCTTACCCTTGTTCGGAAAGTACCTTGCAGCATT
GTTAGAGATGTTCTTGCTAATCTTCAAGAGGTCATTTTGGGAACTAAACTTTTTGTGCTC
TTCATTGCTATCCCTTTCGCCATTCTTGCTCATTACCAAAACTTTGGAAGATCATGGGTT
TTTGGATTGAGTTTAGTTGGACTCACACCACTGGCTGAACGGATCAGCTTTTTGACAGAA
CAAATAGCTTTCTTCACTGGTCCAACAGTTGGAGGGCTTCTAAATGCAACGTGTGGGAAT
GCGACGGAACTGATAATAGCAATTCTTGCTCTGACGCAACACAAAGTAGATGTTGTGAAA
TACTCGCTTTTGGGCTCTATACTTTCAAACCTTCTTCTGGTTCTTGGCACCTCCCTCTTC
TGTGGTGGCATTGCTAATCTCTCCAAGGAACAAAAATATGACAGGAAACAAGCAGACGTG
AACTCACTGCTTTTGTTGTTGGGGCTATTATGTCATATGCTACCATTGATGTTTCGTTAT
GCTGGAGTTGGAGAATCTGCTGCTGCTGCTGCTGTTACAGCTAAAGCAACACTGCTTCTA
TCAAGAGTCAGCTGCATTGTCATGCTCATTGCCTACCTCGGTTACCTAATTTTCCAGTTA
TGGACCCACCGCCAACTTTTTGACGCACAAGCTGAAGAAAATGAAGAAGATGACACAGTG
GAAGAAGAGGAAGCAGTGCTTGGATTCTGGAGTGCATTTGCATGGTTGGTAGGAATGACT
GCAGTAGTTGCTCTATTATCTGAATATGTTGTTGGTACTATTGAGGCAGCATCAGATTCT
TGGGGAATCTCAGTGAGCTTCATTAGTGTTATTTTGCTACCAATTGTTGGAAATGCTGCA
GAACATGCTGGCGCTGTCATTTTTGCTTTCAAAAATAAGTTGGACATTTCTCTGGGAGTT
GCCCTAGGCTCTGCAACTCAAATTGCCATGTTTGTTGTTCCATTAAGTGTAATTGTCGCA
TGGATTATTGGTGAGAGAATGGATCTTGATTTTAGTCTTCTTGAGACTGGCTCCCTTGCT
TTGGCAATAATTGTCACAGCTTTCACTTTACAGGATGGAACATCACATTATATCAAAGGA
TTAGTCCTCCTGCTCTGTTACATTGTCATTGGAGCATGCTTTTTCTTCTACAACAGACCA
CAAAACCAACCAAATGGTGTCAACTTGGGCTCATCAACTGATGGAATCATGAGAGTTTGA

Peptide Sequence

PEP ID

XP_016476937.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 3-like [Nicotiana tabacum]
Sequence

MASSAAPAAETWLLENGNIKPLSKEMRHGHGRSRTAHNVSSSSLRKKSDLTLVRKVPCSI
VRDVLANLQEVILGTKLFVLFIAIPFAILAHYQNFGRSWVFGLSLVGLTPLAERISFLTE
QIAFFTGPTVGGLLNATCGNATELIIAILALTQHKVDVVKYSLLGSILSNLLLVLGTSLF
CGGIANLSKEQKYDRKQADVNSLLLLLGLLCHMLPLMFRYAGVGESAAAAAVTAKATLLL
SRVSCIVMLIAYLGYLIFQLWTHRQLFDAQAEENEEDDTVEEEEAVLGFWSAFAWLVGMT
AVVALLSEYVVGTIEAASDSWGISVSFISVILLPIVGNAAEHAGAVIFAFKNKLDISLGV
ALGSATQIAMFVVPLSVIVAWIIGERMDLDFSLLETGSLALAIIVTAFTLQDGTSHYIKG
LVLLLCYIVIGACFFFYNRPQNQPNGVNLGSSTDGIMRV

Transcript Sequence

Gene sequence data has not been registered.